Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rtl1Q7M732 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rtl1Q7M732 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rtl1Q7M732 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC21.27■■□□□ 1
Rtl1Q7M732 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rtl1Q7M732 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rtl1Q7M732 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rtl1Q7M732 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm24891-201ENSMUST00000104391 136 ntBASIC21.26■□□□□ 0.99
Rtl1Q7M732 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 CT485606.1-201ENSMUST00000213187 878 ntBASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Lig1-210ENSMUST00000165964 3166 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm15352-201ENSMUST00000118696 270 ntBASIC21.26■□□□□ 0.99
Rtl1Q7M732 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm7504-201ENSMUST00000201449 424 ntBASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gm45398-201ENSMUST00000210561 165 ntBASIC21.26■□□□□ 0.99
Rtl1Q7M732 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rtl1Q7M732 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC21.25■□□□□ 0.99
Rtl1Q7M732 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Gm9387-201ENSMUST00000098624 1320 ntBASIC21.25■□□□□ 0.99
Rtl1Q7M732 Gm38089-201ENSMUST00000193585 1514 ntBASIC21.25■□□□□ 0.99
Rtl1Q7M732 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Rtl1Q7M732 n-R5s84-201ENSMUST00000122591 109 ntBASIC21.25■□□□□ 0.99
Rtl1Q7M732 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC21.25■□□□□ 0.99
Rtl1Q7M732 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Gm2517-201ENSMUST00000215651 348 ntBASIC21.25■□□□□ 0.99
Rtl1Q7M732 Gm10254-201ENSMUST00000052888 867 ntBASIC21.25■□□□□ 0.99
Rtl1Q7M732 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Gm18986-201ENSMUST00000216029 1986 ntBASIC21.25■□□□□ 0.99
Rtl1Q7M732 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rtl1Q7M732 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rtl1Q7M732 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Gm3551-201ENSMUST00000190750 664 ntBASIC21.24■□□□□ 0.99
Rtl1Q7M732 D9Wsu149-201ENSMUST00000214169 594 ntBASIC21.24■□□□□ 0.99
Rtl1Q7M732 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Gm11783-201ENSMUST00000119549 885 ntBASIC21.24■□□□□ 0.99
Rtl1Q7M732 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC21.24■□□□□ 0.99
Rtl1Q7M732 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC21.24■□□□□ 0.99
Rtl1Q7M732 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC21.24■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms