Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Gm3786-201ENSMUST00000202659 378 ntBASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Mcf2l-203ENSMUST00000110866 5108 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 AC125108.1-201ENSMUST00000218986 2330 ntBASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ubfd1Q78JW9 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Ubfd1Q78JW9 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubfd1Q78JW9 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubfd1Q78JW9 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm7851-201ENSMUST00000117574 323 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm8566-201ENSMUST00000120174 465 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm20426-201ENSMUST00000173657 440 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm8546-201ENSMUST00000178288 1264 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm6905-201ENSMUST00000205729 511 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm8959-201ENSMUST00000213150 571 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm10288-201ENSMUST00000084614 537 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 AC173482.6-201ENSMUST00000225889 1741 ntBASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.77□□□□□ -0.53
Ubfd1Q78JW9 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm11663-201ENSMUST00000117888 290 ntBASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm13611-201ENSMUST00000118269 318 ntBASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm15004-201ENSMUST00000119192 630 ntBASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm5733-201ENSMUST00000190232 939 ntBASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.76□□□□□ -0.53
Ubfd1Q78JW9 Gm9797-202ENSMUST00000218003 294 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms