Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Gm12164-201ENSMUST00000121695 551 ntBASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Gm26956-201ENSMUST00000182176 986 ntBASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 AC166344.1-202ENSMUST00000224139 234 ntBASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 AC154639.1-201ENSMUST00000224393 2849 ntBASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Sp140Q6NSQ5 Ssh1-202ENSMUST00000112298 5584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm23270-201ENSMUST00000104055 131 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm5940-201ENSMUST00000117582 1068 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm12036-201ENSMUST00000120008 530 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm7722-201ENSMUST00000120646 741 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm2991-201ENSMUST00000173338 480 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Mir8109-201ENSMUST00000184375 117 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm17931-201ENSMUST00000208132 634 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 AC154222.2-201ENSMUST00000225848 607 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Gm7399-201ENSMUST00000032395 858 ntBASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Sp140Q6NSQ5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Sp140Q6NSQ5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms