Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Krt39Q6IFX4 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Krt39Q6IFX4 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Krt39Q6IFX4 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Krt39Q6IFX4 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Krt39Q6IFX4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm16083-201ENSMUST00000125681 2547 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm11658-201ENSMUST00000120913 1008 ntBASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm13316-201ENSMUST00000140537 691 ntBASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm16379-201ENSMUST00000161469 348 ntBASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm37201-201ENSMUST00000191845 523 ntBASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm8762-201ENSMUST00000193486 339 ntBASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm10478-201ENSMUST00000084451 396 ntBASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Krt39Q6IFX4 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Krt39Q6IFX4 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 331.2 ms