Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC9.32□□□□□ -0.92
Notch3Q61982 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Notch3Q61982 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Notch3Q61982 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Notch3Q61982 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.32□□□□□ -0.92
Notch3Q61982 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Notch3Q61982 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC9.32□□□□□ -0.92
Notch3Q61982 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC9.32□□□□□ -0.92
Notch3Q61982 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Gm9358-201ENSMUST00000183067 927 ntBASIC9.32□□□□□ -0.92
Notch3Q61982 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 AC163667.3-201ENSMUST00000225774 222 ntBASIC9.32□□□□□ -0.92
Notch3Q61982 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Notch3Q61982 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Notch3Q61982 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC9.31□□□□□ -0.92
Notch3Q61982 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Notch3Q61982 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Notch3Q61982 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC9.31□□□□□ -0.92
Notch3Q61982 Gm13035-201ENSMUST00000117496 342 ntBASIC9.31□□□□□ -0.92
Notch3Q61982 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC9.31□□□□□ -0.92
Notch3Q61982 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC9.31□□□□□ -0.92
Notch3Q61982 Gm29155-201ENSMUST00000185910 269 ntBASIC9.31□□□□□ -0.92
Notch3Q61982 Gm32999-201ENSMUST00000192693 562 ntBASIC9.31□□□□□ -0.92
Notch3Q61982 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC9.31□□□□□ -0.92
Notch3Q61982 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC9.31□□□□□ -0.92
Notch3Q61982 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Notch3Q61982 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC9.31□□□□□ -0.92
Notch3Q61982 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Plxna4-201ENSMUST00000115096 12877 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.31□□□□□ -0.92
Notch3Q61982 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC9.31□□□□□ -0.92
Notch3Q61982 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC9.31□□□□□ -0.92
Notch3Q61982 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC9.31□□□□□ -0.92
Notch3Q61982 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC9.31□□□□□ -0.92
Notch3Q61982 Gm42937-201ENSMUST00000197360 752 ntBASIC9.31□□□□□ -0.92
Notch3Q61982 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC9.31□□□□□ -0.92
Notch3Q61982 Gm7207-201ENSMUST00000211575 1067 ntBASIC9.31□□□□□ -0.92
Notch3Q61982 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Notch3Q61982 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Notch3Q61982 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Notch3Q61982 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Notch3Q61982 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Notch3Q61982 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Notch3Q61982 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Notch3Q61982 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.3□□□□□ -0.92
Notch3Q61982 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms