Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC9.21□□□□□ -0.93
Foxc1Q61572 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Foxc1Q61572 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Celsr3-207ENSMUST00000213524 9930 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Foxc1Q61572 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Mir669l-201ENSMUST00000103771 98 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm23884-201ENSMUST00000122687 294 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm15819-201ENSMUST00000153089 481 ntTSL 2 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm16379-201ENSMUST00000161469 348 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm17208-201ENSMUST00000168388 535 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.94
Foxc1Q61572 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm20574-201ENSMUST00000182867 917 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Olfr1025-ps1-201ENSMUST00000188749 921 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm19214-201ENSMUST00000191956 1083 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm37599-201ENSMUST00000193067 489 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm8762-201ENSMUST00000193486 339 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm43596-201ENSMUST00000202818 884 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm46436-201ENSMUST00000221851 1294 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 AC154484.1-201ENSMUST00000227311 771 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 AC105408.1-201ENSMUST00000227771 802 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 AC147628.1-201ENSMUST00000228193 688 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Il12a-201ENSMUST00000029345 1303 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm37269-201ENSMUST00000193906 1891 ntBASIC9.21□□□□□ -0.94
Foxc1Q61572 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC9.21□□□□□ -0.94
Foxc1Q61572 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC9.21□□□□□ -0.94
Foxc1Q61572 AC159314.1-201ENSMUST00000216917 3485 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Foxc1Q61572 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm10558-201ENSMUST00000147494 1661 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC9.2□□□□□ -0.94
Foxc1Q61572 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC9.2□□□□□ -0.94
Foxc1Q61572 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Lcor-201ENSMUST00000067795 4810 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Foxc1Q61572 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms