Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.34□□□□□ -0.27
Ift88Q61371 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.34□□□□□ -0.27
Ift88Q61371 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ift88Q61371 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Ift88Q61371 Gm8908-201ENSMUST00000121633 1024 ntBASIC13.34□□□□□ -0.27
Ift88Q61371 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Ift88Q61371 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.34□□□□□ -0.27
Ift88Q61371 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.34□□□□□ -0.27
Ift88Q61371 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Ift88Q61371 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.34□□□□□ -0.27
Ift88Q61371 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.34□□□□□ -0.27
Ift88Q61371 Gm37737-201ENSMUST00000195013 1638 ntBASIC13.34□□□□□ -0.27
Ift88Q61371 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Ift88Q61371 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Ift88Q61371 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Ift88Q61371 Gm37131-201ENSMUST00000192502 1561 ntBASIC13.33□□□□□ -0.28
Ift88Q61371 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.33□□□□□ -0.28
Ift88Q61371 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.33□□□□□ -0.28
Ift88Q61371 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.33□□□□□ -0.28
Ift88Q61371 Gm13316-201ENSMUST00000140537 691 ntBASIC13.33□□□□□ -0.28
Ift88Q61371 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.33□□□□□ -0.28
Ift88Q61371 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.33□□□□□ -0.28
Ift88Q61371 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.33□□□□□ -0.28
Ift88Q61371 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.33□□□□□ -0.28
Ift88Q61371 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Ift88Q61371 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Ift88Q61371 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ift88Q61371 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC13.32□□□□□ -0.28
Ift88Q61371 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC13.32□□□□□ -0.28
Ift88Q61371 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ift88Q61371 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC13.32□□□□□ -0.28
Ift88Q61371 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC13.32□□□□□ -0.28
Ift88Q61371 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.32□□□□□ -0.28
Ift88Q61371 Gm8835-201ENSMUST00000173096 1169 ntBASIC13.32□□□□□ -0.28
Ift88Q61371 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Gm28882-201ENSMUST00000185504 314 ntBASIC13.32□□□□□ -0.28
Ift88Q61371 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.32□□□□□ -0.28
Ift88Q61371 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.32□□□□□ -0.28
Ift88Q61371 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ift88Q61371 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ift88Q61371 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.32□□□□□ -0.28
Ift88Q61371 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC13.32□□□□□ -0.28
Ift88Q61371 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms