Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col12a1Q60847 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Gm5040-201ENSMUST00000218609 800 ntBASIC11.6□□□□□ -0.55
Col12a1Q60847 Gm9507-201ENSMUST00000095491 877 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Col12a1Q60847 Prr13-205ENSMUST00000171245 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.6□□□□□ -0.55
Col12a1Q60847 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.6□□□□□ -0.55
Col12a1Q60847 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC11.6□□□□□ -0.55
Col12a1Q60847 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC11.6□□□□□ -0.55
Col12a1Q60847 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Gm12972-201ENSMUST00000152986 1006 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 AC164437.3-201ENSMUST00000228323 347 ntBASIC11.6□□□□□ -0.55
Col12a1Q60847 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Col12a1Q60847 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.6□□□□□ -0.55
Col12a1Q60847 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.6□□□□□ -0.55
Col12a1Q60847 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC11.6□□□□□ -0.55
Col12a1Q60847 Gm15549-201ENSMUST00000121595 622 ntBASIC11.6□□□□□ -0.55
Col12a1Q60847 C130080G10Rik-204ENSMUST00000155185 954 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC11.6□□□□□ -0.55
Col12a1Q60847 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.6□□□□□ -0.55
Col12a1Q60847 AC154305.2-201ENSMUST00000225813 901 ntBASIC11.6□□□□□ -0.55
Col12a1Q60847 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Col12a1Q60847 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC11.59□□□□□ -0.55
Col12a1Q60847 Dppa3-ps-201ENSMUST00000116499 451 ntBASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm14165-201ENSMUST00000121456 952 ntBASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm9192-201ENSMUST00000183221 985 ntBASIC11.59□□□□□ -0.55
Col12a1Q60847 Map7-203ENSMUST00000213312 795 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gstz1-203ENSMUST00000220574 971 ntTSL 2 BASIC11.59□□□□□ -0.55
Col12a1Q60847 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col12a1Q60847 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm45199-201ENSMUST00000207640 1507 ntBASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm26313-201ENSMUST00000157770 308 ntBASIC11.59□□□□□ -0.55
Col12a1Q60847 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm37365-201ENSMUST00000193109 409 ntBASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm30946-201ENSMUST00000198288 724 ntBASIC11.59□□□□□ -0.55
Col12a1Q60847 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col12a1Q60847 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Col12a1Q60847 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.59□□□□□ -0.55
Col12a1Q60847 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col12a1Q60847 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.59□□□□□ -0.55
Col12a1Q60847 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col12a1Q60847 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col12a1Q60847 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col12a1Q60847 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col12a1Q60847 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col12a1Q60847 Gm14616-201ENSMUST00000131690 314 ntTSL 3 BASIC11.58□□□□□ -0.56
Col12a1Q60847 Cd9-ps-201ENSMUST00000174687 650 ntBASIC11.58□□□□□ -0.56
Col12a1Q60847 Gm7741-201ENSMUST00000181445 989 ntBASIC11.58□□□□□ -0.56
Col12a1Q60847 Ighv5-8-202ENSMUST00000191967 337 ntBASIC11.58□□□□□ -0.56
Col12a1Q60847 Gm12248-203ENSMUST00000219877 1160 ntAPPRIS P5 TSL 5 BASIC11.58□□□□□ -0.56
Col12a1Q60847 Eef1akmt1-201ENSMUST00000022518 880 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col12a1Q60847 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col12a1Q60847 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col12a1Q60847 Sectm1b-202ENSMUST00000081499 1222 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col12a1Q60847 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col12a1Q60847 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC11.58□□□□□ -0.56
Col12a1Q60847 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col12a1Q60847 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col12a1Q60847 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.58□□□□□ -0.56
Col12a1Q60847 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col12a1Q60847 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms