Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Gm8522-201ENSMUST00000118416 1929 ntBASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim38Q5SZ99 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm15547-201ENSMUST00000122152 333 ntBASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm5706-201ENSMUST00000181525 993 ntBASIC12.55□□□□□ -0.4
Trim38Q5SZ99 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm10312-201ENSMUST00000078515 489 ntBASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim38Q5SZ99 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Gm27501-201ENSMUST00000183599 107 ntBASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Gm9368-201ENSMUST00000219348 831 ntBASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim38Q5SZ99 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Gm43727-201ENSMUST00000198021 2647 ntBASIC12.53□□□□□ -0.4
Trim38Q5SZ99 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms