Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm23596-201ENSMUST00000104304 132 ntBASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm16570-201ENSMUST00000161951 436 ntBASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Ighv4-2-201ENSMUST00000192975 362 ntBASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm4157-201ENSMUST00000211647 679 ntBASIC14.47□□□□□ -0.09
Vps54Q5SPW0 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gm26448-201ENSMUST00000082446 203 ntBASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Vps54Q5SPW0 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 AC129931.1-201ENSMUST00000228865 1861 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm15004-201ENSMUST00000119192 630 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm12266-201ENSMUST00000120311 962 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Mir5120-201ENSMUST00000175020 78 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Mir7677-201ENSMUST00000184226 67 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm3332-201ENSMUST00000189337 928 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm28778-201ENSMUST00000190734 785 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm9797-202ENSMUST00000218003 294 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gm42480-201ENSMUST00000198434 2595 ntBASIC14.46□□□□□ -0.09
Vps54Q5SPW0 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Vps54Q5SPW0 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps54Q5SPW0 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps54Q5SPW0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps54Q5SPW0 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps54Q5SPW0 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Vps54Q5SPW0 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps54Q5SPW0 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Vps54Q5SPW0 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm15172-201ENSMUST00000118945 1046 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm26461-201ENSMUST00000175064 290 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm8343-201ENSMUST00000182705 994 ntBASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC14.45□□□□□ -0.1
Vps54Q5SPW0 Gm43184-201ENSMUST00000197247 542 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms