Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc85aQ5SP85 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc85aQ5SP85 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc85aQ5SP85 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ccdc85aQ5SP85 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ccdc85aQ5SP85 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Ccdc85aQ5SP85 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ccdc85aQ5SP85 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm12579-201ENSMUST00000118040 783 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm11836-201ENSMUST00000121022 441 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm12164-201ENSMUST00000121695 551 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm29499-201ENSMUST00000189151 486 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm28329-201ENSMUST00000191208 689 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm29171-201ENSMUST00000191397 486 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 CT485606.1-201ENSMUST00000213187 878 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc85aQ5SP85 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm8731-201ENSMUST00000118088 412 ntBASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm8815-201ENSMUST00000173809 620 ntBASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm19009-201ENSMUST00000223072 823 ntBASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Prr9-201ENSMUST00000070284 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Gm10152-201ENSMUST00000193475 1344 ntBASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Ccdc85aQ5SP85 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Ccdc85aQ5SP85 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Ccdc85aQ5SP85 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms