Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm26956-201ENSMUST00000182176 986 ntBASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm27501-201ENSMUST00000183599 107 ntBASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm9996-201ENSMUST00000070359 913 ntBASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Paupar-201ENSMUST00000194826 3482 ntBASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Gm43447-201ENSMUST00000198471 1535 ntBASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav5d-4Q5R1F6 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Gm5186-201ENSMUST00000218781 920 ntBASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Gm18782-201ENSMUST00000209023 1399 ntBASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav5d-4Q5R1F6 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
Trav5d-4Q5R1F6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms