Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm17870-201ENSMUST00000219489 1174 ntBASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 2810032G03Rik-202ENSMUST00000163627 2514 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 C1rl-201ENSMUST00000049124 3010 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm38157-201ENSMUST00000194178 1698 ntBASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.07□□□□□ -0.96
Trav3-3Q5R1C3 Gm4735-201ENSMUST00000138679 1302 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Gm5855-201ENSMUST00000200240 1305 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Ankub1-202ENSMUST00000197088 1854 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Gm44094-201ENSMUST00000204703 2030 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Mir7684-201ENSMUST00000183858 60 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Gm27306-201ENSMUST00000183970 107 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Gm43575-201ENSMUST00000196420 516 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 AC155258.1-201ENSMUST00000219303 253 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Gm26035-201ENSMUST00000083065 308 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Nucks1-201ENSMUST00000062264 5998 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Uba1-201ENSMUST00000001989 4071 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Lig4-201ENSMUST00000095476 5028 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Sptb-202ENSMUST00000166101 8084 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Trav3-3Q5R1C3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Prorsd1-202ENSMUST00000133103 2126 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Sh3bgrl2-203ENSMUST00000188030 2549 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trav3-3Q5R1C3 Anks1b-216ENSMUST00000182430 3305 ntTSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms