Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Gm8343-201ENSMUST00000182705 994 ntBASIC11.14□□□□□ -0.63
Urb1Q571H0 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC11.14□□□□□ -0.63
Urb1Q571H0 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.14□□□□□ -0.63
Urb1Q571H0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Urb1Q571H0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC11.14□□□□□ -0.63
Urb1Q571H0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.14□□□□□ -0.63
Urb1Q571H0 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.14□□□□□ -0.63
Urb1Q571H0 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Gm24934-201ENSMUST00000103764 111 ntBASIC11.14□□□□□ -0.63
Urb1Q571H0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.14□□□□□ -0.63
Urb1Q571H0 Gm44958-201ENSMUST00000203734 736 ntBASIC11.14□□□□□ -0.63
Urb1Q571H0 Gm45594-201ENSMUST00000211717 241 ntBASIC11.14□□□□□ -0.63
Urb1Q571H0 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.14□□□□□ -0.63
Urb1Q571H0 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Urb1Q571H0 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm13263-201ENSMUST00000121271 838 ntBASIC11.13□□□□□ -0.63
Urb1Q571H0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm5621-201ENSMUST00000187303 640 ntBASIC11.13□□□□□ -0.63
Urb1Q571H0 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.13□□□□□ -0.63
Urb1Q571H0 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC11.13□□□□□ -0.63
Urb1Q571H0 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm6430-201ENSMUST00000054664 1248 ntBASIC11.13□□□□□ -0.63
Urb1Q571H0 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.13□□□□□ -0.63
Urb1Q571H0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm43045-201ENSMUST00000198725 2095 ntBASIC11.13□□□□□ -0.63
Urb1Q571H0 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Urb1Q571H0 Gm11511-201ENSMUST00000118146 540 ntBASIC11.12□□□□□ -0.63
Urb1Q571H0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.12□□□□□ -0.63
Urb1Q571H0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Urb1Q571H0 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC11.12□□□□□ -0.63
Urb1Q571H0 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.12□□□□□ -0.63
Urb1Q571H0 Gm9139-201ENSMUST00000218817 700 ntBASIC11.12□□□□□ -0.63
Urb1Q571H0 Gm19009-201ENSMUST00000223072 823 ntBASIC11.12□□□□□ -0.63
Urb1Q571H0 Prrxl1-205ENSMUST00000228878 723 ntBASIC11.12□□□□□ -0.63
Urb1Q571H0 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Urb1Q571H0 Gm26448-201ENSMUST00000082446 203 ntBASIC11.12□□□□□ -0.63
Urb1Q571H0 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Urb1Q571H0 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Urb1Q571H0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Urb1Q571H0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Urb1Q571H0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Urb1Q571H0 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms