Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Gm15782-201ENSMUST00000121073 445 ntBASIC12.33□□□□□ -0.44
Spire1Q52KF3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Gm23045-201ENSMUST00000175041 96 ntBASIC12.33□□□□□ -0.44
Spire1Q52KF3 Gm4310-201ENSMUST00000177847 889 ntBASIC12.33□□□□□ -0.44
Spire1Q52KF3 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.33□□□□□ -0.44
Spire1Q52KF3 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Spire1Q52KF3 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gm22920-201ENSMUST00000102175 109 ntBASIC12.32□□□□□ -0.44
Spire1Q52KF3 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gm11246-201ENSMUST00000120880 345 ntBASIC12.32□□□□□ -0.44
Spire1Q52KF3 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gm8365-201ENSMUST00000197334 648 ntBASIC12.32□□□□□ -0.44
Spire1Q52KF3 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gm6867-201ENSMUST00000219165 425 ntBASIC12.32□□□□□ -0.44
Spire1Q52KF3 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.32□□□□□ -0.44
Spire1Q52KF3 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Spire1Q52KF3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Pcgf1-207ENSMUST00000177177 854 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.31□□□□□ -0.44
Spire1Q52KF3 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Gm10752-201ENSMUST00000218348 729 ntBASIC12.31□□□□□ -0.44
Spire1Q52KF3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Spire1Q52KF3 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms