Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Gm17931-201ENSMUST00000208132 634 ntBASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Gm45418-202ENSMUST00000210693 649 ntTSL 5 BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Rc3h1Q4VGL6 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm11941-201ENSMUST00000119904 610 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm12201-201ENSMUST00000120657 1234 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm22334-201ENSMUST00000158070 133 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Dleu2-205ENSMUST00000182325 463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm8100-201ENSMUST00000182906 988 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Dleu2-212ENSMUST00000183079 535 ntTSL 3 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm18363-201ENSMUST00000221671 730 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Gm1821-202ENSMUST00000227415 750 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Ntng1-201ENSMUST00000051253 327 ntBASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Rc3h1Q4VGL6 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Gm14724-201ENSMUST00000118400 537 ntBASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Mir1943-201ENSMUST00000158276 73 ntBASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Gm9211-201ENSMUST00000182882 975 ntBASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Gm6781-201ENSMUST00000038304 1242 ntBASIC13.96□□□□□ -0.17
Rc3h1Q4VGL6 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms