Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Gm18294-201ENSMUST00000176980 1748 ntBASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Arhgef40Q3UPH7 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 AC164618.2-201ENSMUST00000224770 573 ntBASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 CT573086.4-201ENSMUST00000226729 342 ntBASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Ccl21a-201ENSMUST00000095114 870 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 4932431P20Rik-201ENSMUST00000098602 1340 ntBASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm12943-201ENSMUST00000119616 210 ntBASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm13117-201ENSMUST00000120894 691 ntBASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm15549-201ENSMUST00000121595 622 ntBASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm15409-201ENSMUST00000135240 520 ntTSL 2 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm29233-201ENSMUST00000190311 281 ntTSL 5 BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 AC154572.1-201ENSMUST00000226098 1204 ntBASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Arhgef40Q3UPH7 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Gm4294-201ENSMUST00000105169 614 ntBASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Srd5a3-202ENSMUST00000113506 1241 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Gm17192-201ENSMUST00000169031 511 ntBASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Gm26989-201ENSMUST00000182608 749 ntBASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Arhgef40Q3UPH7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Arhgef40Q3UPH7 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Arhgef40Q3UPH7 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Gm37019-201ENSMUST00000192133 2134 ntBASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Gm19587-201ENSMUST00000191395 545 ntBASIC17.45■□□□□ 0.38
Arhgef40Q3UPH7 Gm9884-201ENSMUST00000194343 1222 ntBASIC17.45■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms