Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Firre-206ENSMUST00000203933 5555 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Tdrd1-202ENSMUST00000111604 5187 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Kif13b-203ENSMUST00000224503 8865 ntAPPRIS ALT2 BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1brtQ3UNC9 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Cyp2s1-202ENSMUST00000108395 3161 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Gm13394-201ENSMUST00000121658 1000 ntBASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Gm45612-201ENSMUST00000211320 160 ntBASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 AC159114.1-201ENSMUST00000220349 266 ntBASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Mir339-201ENSMUST00000083659 96 ntBASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Gm8038-201ENSMUST00000164674 2044 ntBASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Cks1brtQ3UNC9 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Olfr569-202ENSMUST00000217024 4741 ntAPPRIS P1 TSL 5 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm6124-201ENSMUST00000188240 2580 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm12291-201ENSMUST00000121627 311 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Mir3113-201ENSMUST00000175478 76 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm29541-201ENSMUST00000191351 678 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Gm5312-201ENSMUST00000203728 547 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Shd-206ENSMUST00000225145 998 ntBASIC8.62□□□□□ -1.03
Cks1brtQ3UNC9 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC8.62□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 79.2 ms