Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Spg11Q3UHA3 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm22661-201ENSMUST00000104192 132 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm7861-201ENSMUST00000110749 506 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm7849-201ENSMUST00000110752 488 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Rptoros-201ENSMUST00000127450 1174 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm20493-201ENSMUST00000173706 213 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm26272-201ENSMUST00000179241 132 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm8226-201ENSMUST00000190511 798 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm18010-201ENSMUST00000203553 202 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 AC154477.1-201ENSMUST00000226515 773 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 AC137842.2-201ENSMUST00000227734 797 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm4978-201ENSMUST00000071565 801 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm44065-201ENSMUST00000203184 3527 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm11736-201ENSMUST00000121468 505 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm26313-201ENSMUST00000157770 308 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm18035-201ENSMUST00000211962 589 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 AC154213.1-201ENSMUST00000228234 583 ntBASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Cxcl10-201ENSMUST00000038816 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC11.07□□□□□ -0.64
Spg11Q3UHA3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Mir1190-201ENSMUST00000116925 96 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Ighv5-1-201ENSMUST00000193324 353 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Gm38117-201ENSMUST00000194653 939 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Ptma-201ENSMUST00000045897 1216 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Olfr669-201ENSMUST00000098164 954 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Gm18782-201ENSMUST00000209023 1399 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Psmc1-201ENSMUST00000021595 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Spg11Q3UHA3 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms