Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Olfr284-202ENSMUST00000206647 966 ntBASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Cts7-204ENSMUST00000225321 1257 ntBASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Gm37849-201ENSMUST00000194722 1881 ntBASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Trafd1Q3UDK1 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 AC126257.2-201ENSMUST00000215507 2300 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm5706-201ENSMUST00000181525 993 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm42627-201ENSMUST00000197347 224 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm7783-201ENSMUST00000204795 781 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm18935-201ENSMUST00000212692 664 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 AC154462.2-201ENSMUST00000227519 370 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trafd1Q3UDK1 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trafd1Q3UDK1 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Trafd1Q3UDK1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trafd1Q3UDK1 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Trafd1Q3UDK1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
Trafd1Q3UDK1 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.48
Trafd1Q3UDK1 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Gm14247-201ENSMUST00000120950 237 ntBASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Gm38158-201ENSMUST00000194617 339 ntBASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Gm6334-201ENSMUST00000207083 228 ntBASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trafd1Q3UDK1 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms