Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Gm43962-201ENSMUST00000203898 190 ntBASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Nsd1-205ENSMUST00000224693 852 ntBASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Gm43721-201ENSMUST00000199677 2313 ntBASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Shcbp1lQ3TTP0 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm7568-202ENSMUST00000160446 709 ntTSL 3 BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm5616-201ENSMUST00000165252 384 ntBASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm17040-202ENSMUST00000170597 889 ntBASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm8741-201ENSMUST00000174736 384 ntBASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm9630-201ENSMUST00000178304 885 ntBASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm28071-201ENSMUST00000190355 478 ntBASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Gm37666-201ENSMUST00000194110 866 ntBASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Shcbp1lQ3TTP0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Gm43289-201ENSMUST00000200537 1475 ntBASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Gm22133-201ENSMUST00000102082 109 ntBASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Gm23912-201ENSMUST00000104687 87 ntBASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Shcbp1lQ3TTP0 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC12.21□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms