Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Gm6226-201ENSMUST00000117765 1146 ntBASIC9.9□□□□□ -0.82
Trim63Q38HM4 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 AC132317.1-201ENSMUST00000227227 962 ntBASIC9.9□□□□□ -0.82
Trim63Q38HM4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Birc2-201ENSMUST00000054878 378 ntBASIC9.9□□□□□ -0.82
Trim63Q38HM4 Nfrkb-201ENSMUST00000086167 5161 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Ncbp3-201ENSMUST00000021135 12106 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Mybpc3-201ENSMUST00000111430 4154 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Bcl2-202ENSMUST00000189999 2841 ntBASIC9.9□□□□□ -0.82
Trim63Q38HM4 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Trim63Q38HM4 Rxfp2-201ENSMUST00000065745 2539 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.83
Trim63Q38HM4 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Trim63Q38HM4 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Myh10-201ENSMUST00000018887 7667 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Rsrc2-202ENSMUST00000057795 2270 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 C130060K24Rik-203ENSMUST00000170608 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gm7230-201ENSMUST00000173026 815 ntBASIC9.89□□□□□ -0.83
Trim63Q38HM4 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Syn2-203ENSMUST00000203450 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Olfr6-203ENSMUST00000213651 4457 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Ighmbp2-201ENSMUST00000025751 3720 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 C130013H08Rik-201ENSMUST00000197569 3692 ntBASIC9.89□□□□□ -0.83
Trim63Q38HM4 Atf7ip2-201ENSMUST00000044005 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Mid1-201ENSMUST00000036753 3753 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Serpinb8-202ENSMUST00000112706 4581 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Trim63Q38HM4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Pigk-204ENSMUST00000159899 4737 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.88□□□□□ -0.83
Trim63Q38HM4 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Bcor-201ENSMUST00000043441 6113 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Serac1-202ENSMUST00000097432 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Dip2c-202ENSMUST00000169960 4801 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm42571-201ENSMUST00000201197 2464 ntBASIC9.88□□□□□ -0.83
Trim63Q38HM4 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
Trim63Q38HM4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC9.88□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms