Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Igkv12-41-201ENSMUST00000103369 347 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm8616-201ENSMUST00000222175 1037 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm16439-201ENSMUST00000100687 564 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm436-201ENSMUST00000105747 1224 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm15258-201ENSMUST00000153801 741 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Rpl15-ps2-201ENSMUST00000184247 613 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm37678-201ENSMUST00000192908 1146 ntBASIC6.17□□□□□ -1.42
Ush2AQ2QI47 6430531B16Rik-205ENSMUST00000210254 952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gm39348-201ENSMUST00000216861 640 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Pole-202ENSMUST00000112481 1523 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Ush2AQ2QI47 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm15374-201ENSMUST00000119313 844 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Aqp7-202ENSMUST00000054945 2154 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Morf4l2-215ENSMUST00000169418 1782 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Slc10a4-202ENSMUST00000201304 1419 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Psmb3-201ENSMUST00000103147 766 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm13215-201ENSMUST00000117559 472 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Smt3h2-ps2-201ENSMUST00000122370 288 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 4933439K11Rik-202ENSMUST00000140307 941 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Rab11a-204ENSMUST00000167569 726 ntTSL 3 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm28937-201ENSMUST00000185413 695 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm29400-201ENSMUST00000187208 695 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm28662-201ENSMUST00000188446 695 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm28251-201ENSMUST00000188835 695 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm8525-201ENSMUST00000189674 861 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm37318-201ENSMUST00000194325 695 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm38017-201ENSMUST00000194768 695 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm37287-201ENSMUST00000195449 695 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm37793-201ENSMUST00000195548 695 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm15401-201ENSMUST00000081929 1107 ntTSL 5 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm42971-201ENSMUST00000199228 2079 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Pfdn6-206ENSMUST00000179418 514 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 AC130219.2-201ENSMUST00000228765 807 ntBASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ssna1-201ENSMUST00000028342 862 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Supt4a-201ENSMUST00000093955 706 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Ush2AQ2QI47 Mcph1-205ENSMUST00000146819 2067 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 313.6 ms