Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Cdx4Q07424 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Cdx4Q07424 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm43858-201ENSMUST00000199418 1778 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm43721-201ENSMUST00000199677 2313 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm15236-201ENSMUST00000117309 379 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm13316-201ENSMUST00000140537 691 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm17376-201ENSMUST00000166016 84 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm2546-201ENSMUST00000182630 991 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm29199-201ENSMUST00000187766 775 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.37□□□□□ -0.91
Cdx4Q07424 AC122371.3-201ENSMUST00000223402 1061 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC9.37□□□□□ -0.91
Cdx4Q07424 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Cdx4Q07424 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Cdx4Q07424 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Gm37827-201ENSMUST00000194486 1542 ntBASIC9.36□□□□□ -0.91
Cdx4Q07424 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Klhl3-201ENSMUST00000091583 6871 ntTSL 5 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cdx4Q07424 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Gm10782-202ENSMUST00000223775 1480 ntBASIC9.36□□□□□ -0.91
Cdx4Q07424 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC9.36□□□□□ -0.91
Cdx4Q07424 Gm13394-201ENSMUST00000121658 1000 ntBASIC9.36□□□□□ -0.91
Cdx4Q07424 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Cdx4Q07424 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.36□□□□□ -0.91
Cdx4Q07424 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC9.36□□□□□ -0.91
Cdx4Q07424 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC9.36□□□□□ -0.91
Cdx4Q07424 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Gm44405-201ENSMUST00000198952 126 ntBASIC9.36□□□□□ -0.91
Cdx4Q07424 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC9.36□□□□□ -0.91
Cdx4Q07424 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms