Protein–RNA interactions for Protein: Q06831

Sox4, Transcription factor SOX-4, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox4Q06831 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.9□□□□□ -0.5
Sox4Q06831 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC11.9□□□□□ -0.5
Sox4Q06831 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC11.9□□□□□ -0.5
Sox4Q06831 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Gm5616-201ENSMUST00000165252 384 ntBASIC11.9□□□□□ -0.5
Sox4Q06831 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Sox4Q06831 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Gm8741-201ENSMUST00000174736 384 ntBASIC11.9□□□□□ -0.5
Sox4Q06831 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Gm4607-201ENSMUST00000206649 577 ntBASIC11.9□□□□□ -0.5
Sox4Q06831 Ms4a8a-201ENSMUST00000025636 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox4Q06831 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Sox4Q06831 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox4Q06831 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Sox4Q06831 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Sox4Q06831 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.9□□□□□ -0.5
Sox4Q06831 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Sox4Q06831 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.51
Sox4Q06831 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Sox4Q06831 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.9□□□□□ -0.51
Sox4Q06831 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Sox4Q06831 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox4Q06831 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.89□□□□□ -0.51
Sox4Q06831 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox4Q06831 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC11.89□□□□□ -0.51
Sox4Q06831 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC11.89□□□□□ -0.51
Sox4Q06831 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Sox4Q06831 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox4Q06831 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.89□□□□□ -0.51
Sox4Q06831 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 AY036118-201ENSMUST00000200021 923 ntBASIC11.89□□□□□ -0.51
Sox4Q06831 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.89□□□□□ -0.51
Sox4Q06831 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Sox4Q06831 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 A330093E20Rik-202ENSMUST00000184994 2327 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.89□□□□□ -0.51
Sox4Q06831 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
Sox4Q06831 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Sox4Q06831 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC11.89□□□□□ -0.51
Sox4Q06831 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.89□□□□□ -0.51
Sox4Q06831 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Sox4Q06831 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Sox4Q06831 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Sox4Q06831 Gm5847-201ENSMUST00000178959 1595 ntBASIC11.88□□□□□ -0.51
Sox4Q06831 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC11.88□□□□□ -0.51
Sox4Q06831 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox4Q06831 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Sox4Q06831 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Sox4Q06831 Gm22133-201ENSMUST00000102082 109 ntBASIC11.88□□□□□ -0.51
Sox4Q06831 Gm14028-201ENSMUST00000117434 479 ntBASIC11.88□□□□□ -0.51
Sox4Q06831 Gm5419-201ENSMUST00000119301 527 ntBASIC11.88□□□□□ -0.51
Sox4Q06831 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.88□□□□□ -0.51
Sox4Q06831 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms