Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Sox8Q04886 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.73□□□□□ -0.37
Sox8Q04886 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Adh4-201ENSMUST00000013458 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm14058-201ENSMUST00000116082 735 ntBASIC12.73□□□□□ -0.37
Sox8Q04886 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC12.73□□□□□ -0.37
Sox8Q04886 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm42629-201ENSMUST00000199063 1102 ntBASIC12.73□□□□□ -0.37
Sox8Q04886 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm21811-201ENSMUST00000096485 930 ntBASIC12.73□□□□□ -0.37
Sox8Q04886 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.73□□□□□ -0.37
Sox8Q04886 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Sox8Q04886 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Sox8Q04886 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Sox8Q04886 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox8Q04886 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox8Q04886 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Sox8Q04886 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Sox8Q04886 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox8Q04886 Gm37348-201ENSMUST00000193104 1789 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Gm13035-201ENSMUST00000117496 342 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Gm12501-201ENSMUST00000119163 529 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Gm11331-201ENSMUST00000119764 288 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Gm15610-201ENSMUST00000120584 195 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.72□□□□□ -0.37
Sox8Q04886 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Gm8343-201ENSMUST00000182705 994 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Gm42682-201ENSMUST00000198349 1265 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Rps6ka6-203ENSMUST00000096348 4151 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Sox8Q04886 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.72□□□□□ -0.37
Sox8Q04886 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox8Q04886 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Sox8Q04886 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox8Q04886 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Sox8Q04886 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC12.72□□□□□ -0.37
Sox8Q04886 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Sox8Q04886 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Sox8Q04886 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox8Q04886 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox8Q04886 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox8Q04886 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Sox8Q04886 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.71□□□□□ -0.37
Sox8Q04886 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms