Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
GabpaQ00422 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
GabpaQ00422 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GabpaQ00422 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
GabpaQ00422 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC13.69□□□□□ -0.22
GabpaQ00422 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC13.69□□□□□ -0.22
GabpaQ00422 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GabpaQ00422 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.69□□□□□ -0.22
GabpaQ00422 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC13.69□□□□□ -0.22
GabpaQ00422 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GabpaQ00422 Gm6867-201ENSMUST00000219165 425 ntBASIC13.69□□□□□ -0.22
GabpaQ00422 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GabpaQ00422 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
GabpaQ00422 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GabpaQ00422 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
GabpaQ00422 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.68□□□□□ -0.22
GabpaQ00422 Gm11667-201ENSMUST00000119828 486 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC13.68□□□□□ -0.22
GabpaQ00422 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC13.68□□□□□ -0.22
GabpaQ00422 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC13.68□□□□□ -0.22
GabpaQ00422 Gm8815-201ENSMUST00000173809 620 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 Mir7032-201ENSMUST00000185154 79 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC13.68□□□□□ -0.22
GabpaQ00422 Gm5714-201ENSMUST00000197343 566 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 AC113082.1-201ENSMUST00000217324 327 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC13.68□□□□□ -0.22
GabpaQ00422 AC122408.1-201ENSMUST00000218949 218 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 CT009713.8-202ENSMUST00000224732 385 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 AC135469.1-201ENSMUST00000225984 772 ntBASIC13.68□□□□□ -0.22
GabpaQ00422 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GabpaQ00422 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.68□□□□□ -0.22
GabpaQ00422 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GabpaQ00422 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
GabpaQ00422 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
GabpaQ00422 Gm12579-201ENSMUST00000118040 783 ntBASIC13.67□□□□□ -0.22
GabpaQ00422 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC13.67□□□□□ -0.22
GabpaQ00422 Gm7666-201ENSMUST00000146631 819 ntBASIC13.67□□□□□ -0.22
GabpaQ00422 Gm22144-201ENSMUST00000157402 102 ntBASIC13.67□□□□□ -0.22
GabpaQ00422 Gm9540-201ENSMUST00000188230 478 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms