Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm24934-201ENSMUST00000103764 111 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm9022-201ENSMUST00000182482 992 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm44262-201ENSMUST00000204969 372 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Nkx3-2P97503 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.47□□□□□ -0.57
Nkx3-2P97503 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Nkx3-2P97503 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Aldoa-203ENSMUST00000106348 1460 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Mir5120-201ENSMUST00000175020 78 ntBASIC11.46□□□□□ -0.57
Nkx3-2P97503 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.46□□□□□ -0.57
Nkx3-2P97503 Gm37666-201ENSMUST00000194110 866 ntBASIC11.46□□□□□ -0.57
Nkx3-2P97503 AY036118-201ENSMUST00000200021 923 ntBASIC11.46□□□□□ -0.57
Nkx3-2P97503 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.46□□□□□ -0.57
Nkx3-2P97503 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Gm8385-201ENSMUST00000058999 643 ntBASIC11.46□□□□□ -0.57
Nkx3-2P97503 Gm26035-201ENSMUST00000083065 308 ntBASIC11.46□□□□□ -0.57
Nkx3-2P97503 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Nkx3-2P97503 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Gm15991-202ENSMUST00000212123 3565 ntBASIC11.46□□□□□ -0.58
Nkx3-2P97503 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.46□□□□□ -0.58
Nkx3-2P97503 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx3-2P97503 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.45□□□□□ -0.58
Nkx3-2P97503 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx3-2P97503 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms