Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm4986-201ENSMUST00000119731 549 ntBASIC12.45□□□□□ -0.42
Trim43bP86448 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim43bP86448 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.45□□□□□ -0.42
Trim43bP86448 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm21769-201ENSMUST00000211922 111 ntBASIC12.45□□□□□ -0.42
Trim43bP86448 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC12.45□□□□□ -0.42
Trim43bP86448 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trim43bP86448 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm43102-201ENSMUST00000201004 2324 ntBASIC12.45□□□□□ -0.42
Trim43bP86448 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trim43bP86448 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trim43bP86448 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim43bP86448 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim43bP86448 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43bP86448 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43bP86448 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim43bP86448 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trim43bP86448 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.44□□□□□ -0.42
Trim43bP86448 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC12.44□□□□□ -0.42
Trim43bP86448 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.44□□□□□ -0.42
Trim43bP86448 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC12.44□□□□□ -0.42
Trim43bP86448 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.44□□□□□ -0.42
Trim43bP86448 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.44□□□□□ -0.42
Trim43bP86448 Gm7783-201ENSMUST00000204795 781 ntBASIC12.44□□□□□ -0.42
Trim43bP86448 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Gm5904-201ENSMUST00000210286 865 ntBASIC12.44□□□□□ -0.42
Trim43bP86448 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.44□□□□□ -0.42
Trim43bP86448 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.44□□□□□ -0.42
Trim43bP86448 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim43bP86448 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Trim43bP86448 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim43bP86448 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trim43bP86448 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Trim43bP86448 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trim43bP86448 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.43□□□□□ -0.42
Trim43bP86448 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trim43bP86448 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Trim43bP86448 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trim43bP86448 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms