Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Msx3P70354 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Msx3P70354 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Msx3P70354 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Msx3P70354 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Msx3P70354 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Msx3P70354 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Msx3P70354 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.41□□□□□ -0.42
Msx3P70354 Gm14644-201ENSMUST00000116671 647 ntBASIC12.41□□□□□ -0.42
Msx3P70354 Gm12241-201ENSMUST00000118330 726 ntBASIC12.41□□□□□ -0.42
Msx3P70354 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC12.41□□□□□ -0.42
Msx3P70354 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC12.41□□□□□ -0.42
Msx3P70354 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Msx3P70354 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Msx3P70354 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.41□□□□□ -0.42
Msx3P70354 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Msx3P70354 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.41□□□□□ -0.42
Msx3P70354 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.41□□□□□ -0.42
Msx3P70354 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.41□□□□□ -0.42
Msx3P70354 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Gm43051-201ENSMUST00000201096 2678 ntBASIC12.41□□□□□ -0.42
Msx3P70354 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Msx3P70354 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Pcdhgb5-201ENSMUST00000192535 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Gm42913-201ENSMUST00000197936 1853 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.4□□□□□ -0.42
Msx3P70354 Gm12015-201ENSMUST00000117065 843 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Gm13392-201ENSMUST00000117708 150 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC12.4□□□□□ -0.42
Msx3P70354 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC12.4□□□□□ -0.42
Msx3P70354 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.4□□□□□ -0.42
Msx3P70354 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Msx3P70354 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Gm3096-201ENSMUST00000185770 364 ntBASIC12.4□□□□□ -0.42
Msx3P70354 A430027H14Rik-202ENSMUST00000192797 618 ntTSL 2 BASIC12.4□□□□□ -0.42
Msx3P70354 Gm8712-201ENSMUST00000221090 701 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.4□□□□□ -0.42
Msx3P70354 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.4□□□□□ -0.42
Msx3P70354 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
Msx3P70354 Gm44152-201ENSMUST00000205007 1691 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.4□□□□□ -0.42
Msx3P70354 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Gm8155-201ENSMUST00000216363 1612 ntBASIC12.4□□□□□ -0.42
Msx3P70354 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Msx3P70354 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.43
Msx3P70354 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Msx3P70354 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Msx3P70354 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.39□□□□□ -0.43
Msx3P70354 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Msx3P70354 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms