Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.33□□□□□ -0.6
Six5P70178 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.33□□□□□ -0.6
Six5P70178 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
Six5P70178 Gm26631-201ENSMUST00000181462 2505 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Six5P70178 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.32□□□□□ -0.6
Six5P70178 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 E030026E10Rik-201ENSMUST00000200395 2217 ntBASIC11.32□□□□□ -0.6
Six5P70178 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Six5P70178 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Six5P70178 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.32□□□□□ -0.6
Six5P70178 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.32□□□□□ -0.6
Six5P70178 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.32□□□□□ -0.6
Six5P70178 Gm25668-201ENSMUST00000157700 129 ntBASIC11.32□□□□□ -0.6
Six5P70178 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC11.32□□□□□ -0.6
Six5P70178 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Six5P70178 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Gm38317-201ENSMUST00000195564 343 ntBASIC11.32□□□□□ -0.6
Six5P70178 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.32□□□□□ -0.6
Six5P70178 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.32□□□□□ -0.6
Six5P70178 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Six5P70178 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Six5P70178 Olfr582-201ENSMUST00000098212 960 ntBASIC11.32□□□□□ -0.6
Six5P70178 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Six5P70178 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Six5P70178 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Six5P70178 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Six5P70178 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Six5P70178 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Six5P70178 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Six5P70178 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC11.31□□□□□ -0.6
Six5P70178 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.31□□□□□ -0.6
Six5P70178 AA914427-201ENSMUST00000193194 1166 ntBASIC11.31□□□□□ -0.6
Six5P70178 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.31□□□□□ -0.6
Six5P70178 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.31□□□□□ -0.6
Six5P70178 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 AC122463.1-201ENSMUST00000214559 597 ntTSL 3 BASIC11.31□□□□□ -0.6
Six5P70178 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.31□□□□□ -0.6
Six5P70178 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.31□□□□□ -0.6
Six5P70178 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.31□□□□□ -0.6
Six5P70178 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Six5P70178 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Gm10782-202ENSMUST00000223775 1480 ntBASIC11.31□□□□□ -0.6
Six5P70178 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.31□□□□□ -0.6
Six5P70178 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.31□□□□□ -0.6
Six5P70178 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Six5P70178 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Six5P70178 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms