Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Hmgb1P63158 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Gm45165-201ENSMUST00000207763 1631 ntBASIC13.34□□□□□ -0.27
Hmgb1P63158 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC13.34□□□□□ -0.27
Hmgb1P63158 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Hmgb1P63158 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Hmgb1P63158 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hmgb1P63158 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Hmgb1P63158 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 AC154671.1-201ENSMUST00000228617 1578 ntBASIC13.33□□□□□ -0.28
Hmgb1P63158 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Mir1982-201ENSMUST00000157368 74 ntBASIC13.33□□□□□ -0.28
Hmgb1P63158 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Gm8801-201ENSMUST00000173255 1064 ntBASIC13.33□□□□□ -0.28
Hmgb1P63158 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC13.33□□□□□ -0.28
Hmgb1P63158 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Gm18187-201ENSMUST00000196476 984 ntBASIC13.33□□□□□ -0.28
Hmgb1P63158 Gm44711-201ENSMUST00000205414 1264 ntBASIC13.33□□□□□ -0.28
Hmgb1P63158 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.33□□□□□ -0.28
Hmgb1P63158 AC153929.1-201ENSMUST00000219009 303 ntBASIC13.33□□□□□ -0.28
Hmgb1P63158 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Hmgb1P63158 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.33□□□□□ -0.28
Hmgb1P63158 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Olfr478-202ENSMUST00000210173 2477 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 AC122860.2-201ENSMUST00000217967 2671 ntBASIC13.33□□□□□ -0.28
Hmgb1P63158 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Hmgb1P63158 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmgb1P63158 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Gm22018-201ENSMUST00000104357 131 ntBASIC13.32□□□□□ -0.28
Hmgb1P63158 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Gm25043-201ENSMUST00000158604 212 ntBASIC13.32□□□□□ -0.28
Hmgb1P63158 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Mospd4-201ENSMUST00000180618 576 ntBASIC13.32□□□□□ -0.28
Hmgb1P63158 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.32□□□□□ -0.28
Hmgb1P63158 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.32□□□□□ -0.28
Hmgb1P63158 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmgb1P63158 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms