Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Cks1bP61025 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC8.66□□□□□ -1.02
Cks1bP61025 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Polr2a-201ENSMUST00000058470 6740 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Itgad-204ENSMUST00000177111 3845 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
Cks1bP61025 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 G630064G18Rik-201ENSMUST00000209814 1795 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
Cks1bP61025 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Celsr3-201ENSMUST00000024238 11547 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Prdm1-202ENSMUST00000105490 4025 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
Cks1bP61025 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Rd3-202ENSMUST00000180463 3724 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC8.65□□□□□ -1.02
Cks1bP61025 Ar-201ENSMUST00000052837 10048 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Gm21038-201ENSMUST00000222205 1383 ntBASIC8.65□□□□□ -1.02
Cks1bP61025 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC8.65□□□□□ -1.02
Cks1bP61025 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Gm12416-201ENSMUST00000120911 1008 ntBASIC8.65□□□□□ -1.02
Cks1bP61025 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC8.65□□□□□ -1.02
Cks1bP61025 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC8.65□□□□□ -1.02
Cks1bP61025 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Gm6458-201ENSMUST00000211573 635 ntBASIC8.65□□□□□ -1.02
Cks1bP61025 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Gm9797-201ENSMUST00000052902 613 ntBASIC8.65□□□□□ -1.02
Cks1bP61025 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
Cks1bP61025 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC8.65□□□□□ -1.02
Cks1bP61025 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Tmem184b-205ENSMUST00000228002 3315 ntBASIC8.65□□□□□ -1.03
Cks1bP61025 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC8.65□□□□□ -1.03
Cks1bP61025 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Il27ra-201ENSMUST00000005601 2664 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 R3hdm2-201ENSMUST00000064793 4175 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.65□□□□□ -1.03
Cks1bP61025 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1bP61025 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1bP61025 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1bP61025 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1bP61025 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1bP61025 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1bP61025 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
Cks1bP61025 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC8.64□□□□□ -1.03
Cks1bP61025 1700019J19Rik-205ENSMUST00000216531 2813 ntTSL 5 BASIC8.64□□□□□ -1.03
Cks1bP61025 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC8.64□□□□□ -1.03
Cks1bP61025 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
Cks1bP61025 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC8.64□□□□□ -1.03
Cks1bP61025 Mlh3-202ENSMUST00000166821 5420 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms