Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Gm24830-201ENSMUST00000102024 166 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC9.75□□□□□ -0.85
Sssca1P56873 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
Sssca1P56873 Gm5637-201ENSMUST00000153890 1119 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC9.75□□□□□ -0.85
Sssca1P56873 Gm9002-201ENSMUST00000178437 499 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC9.75□□□□□ -0.85
Sssca1P56873 Gtpbp10-211ENSMUST00000198799 648 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 AC126253.1-202ENSMUST00000226732 835 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Gm26232-201ENSMUST00000083360 166 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Rnu1b6-201ENSMUST00000083839 166 ntBASIC9.75□□□□□ -0.85
Sssca1P56873 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sssca1P56873 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.75□□□□□ -0.85
Sssca1P56873 AC122197.2-201ENSMUST00000219196 1635 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Sssca1P56873 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Sssca1P56873 AC108858.2-201ENSMUST00000228186 1425 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Anapc4-201ENSMUST00000031072 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Gm17230-201ENSMUST00000171194 3942 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Gm12036-201ENSMUST00000120008 530 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC9.74□□□□□ -0.85
Sssca1P56873 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Gm26927-201ENSMUST00000182385 965 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Gm42442-201ENSMUST00000197951 1133 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Gm5781-201ENSMUST00000219792 443 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Dhrs4-202ENSMUST00000226168 828 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
Sssca1P56873 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Gm10076-201ENSMUST00000073238 384 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Sssca1P56873 Gm10268-201ENSMUST00000085340 555 ntBASIC9.74□□□□□ -0.85
Sssca1P56873 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
Sssca1P56873 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
Sssca1P56873 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms