Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.54□□□□□ -0.56
Cdkn2bP55271 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Gm38055-201ENSMUST00000195353 2217 ntBASIC11.54□□□□□ -0.56
Cdkn2bP55271 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.54□□□□□ -0.56
Cdkn2bP55271 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Cdkn2bP55271 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.54□□□□□ -0.56
Cdkn2bP55271 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC11.54□□□□□ -0.56
Cdkn2bP55271 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.53□□□□□ -0.56
Cdkn2bP55271 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.53□□□□□ -0.56
Cdkn2bP55271 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gm7653-201ENSMUST00000214567 508 ntBASIC11.53□□□□□ -0.56
Cdkn2bP55271 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gm8420-201ENSMUST00000097103 598 ntBASIC11.53□□□□□ -0.56
Cdkn2bP55271 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.53□□□□□ -0.56
Cdkn2bP55271 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Cdkn2bP55271 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.52□□□□□ -0.56
Cdkn2bP55271 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Dnmt3l-202ENSMUST00000123940 1452 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.56
Cdkn2bP55271 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.52□□□□□ -0.57
Cdkn2bP55271 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Gm15610-201ENSMUST00000120584 195 ntBASIC11.52□□□□□ -0.57
Cdkn2bP55271 Gm14441-201ENSMUST00000121960 540 ntBASIC11.52□□□□□ -0.57
Cdkn2bP55271 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC11.52□□□□□ -0.57
Cdkn2bP55271 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms