Protein–RNA interactions for Protein: P55096

Abcd3, ATP-binding cassette sub-family D member 3, mousemouse

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd3P55096 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC10.82□□□□□ -0.68
Abcd3P55096 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
Abcd3P55096 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC10.82□□□□□ -0.68
Abcd3P55096 Gm12241-201ENSMUST00000118330 726 ntBASIC10.82□□□□□ -0.68
Abcd3P55096 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.82□□□□□ -0.68
Abcd3P55096 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC10.82□□□□□ -0.68
Abcd3P55096 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.82□□□□□ -0.68
Abcd3P55096 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC10.82□□□□□ -0.68
Abcd3P55096 Gm6621-201ENSMUST00000193251 772 ntBASIC10.82□□□□□ -0.68
Abcd3P55096 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC10.82□□□□□ -0.68
Abcd3P55096 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Abcd3P55096 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.82□□□□□ -0.68
Abcd3P55096 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.82□□□□□ -0.68
Abcd3P55096 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Abcd3P55096 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Abcd3P55096 Arhgef3-204ENSMUST00000225949 3198 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Abcd3P55096 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm18222-201ENSMUST00000202416 1387 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Abcd3P55096 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Abcd3P55096 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm15198-201ENSMUST00000117283 177 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Gm15547-201ENSMUST00000122152 333 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm5706-201ENSMUST00000181525 993 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Gm43179-201ENSMUST00000198797 275 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC10.81□□□□□ -0.68
Abcd3P55096 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Gm7399-201ENSMUST00000032395 858 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm10312-201ENSMUST00000078515 489 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Abcd3P55096 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
Abcd3P55096 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Abcd3P55096 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Abcd3P55096 AC093022.4-203ENSMUST00000228523 2657 ntBASIC10.81□□□□□ -0.68
Abcd3P55096 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Abcd3P55096 Gm43075-201ENSMUST00000198613 3905 ntBASIC10.8□□□□□ -0.68
Abcd3P55096 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Abcd3P55096 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Abcd3P55096 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms