Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Shmt1P50431 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Shmt1P50431 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Shmt1P50431 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Lamr1-ps1-201ENSMUST00000119759 874 ntBASIC12.76□□□□□ -0.37
Shmt1P50431 Gm17040-202ENSMUST00000170597 889 ntBASIC12.76□□□□□ -0.37
Shmt1P50431 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Gm42997-202ENSMUST00000200321 985 ntBASIC12.76□□□□□ -0.37
Shmt1P50431 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Gm270-201ENSMUST00000223010 976 ntBASIC12.76□□□□□ -0.37
Shmt1P50431 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Shmt1P50431 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Shmt1P50431 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.76□□□□□ -0.37
Shmt1P50431 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Shmt1P50431 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Matn2-203ENSMUST00000226766 3252 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Gm15515-201ENSMUST00000117827 822 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.75□□□□□ -0.37
Shmt1P50431 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Glmp-208ENSMUST00000176519 447 ntTSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Shmt1P50431 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Gm37986-201ENSMUST00000193285 383 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.75□□□□□ -0.37
Shmt1P50431 AU022133-201ENSMUST00000200601 873 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC12.75□□□□□ -0.37
Shmt1P50431 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Shmt1P50431 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Shmt1P50431 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.75□□□□□ -0.37
Shmt1P50431 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Cog3-203ENSMUST00000227473 4197 ntBASIC12.75□□□□□ -0.37
Shmt1P50431 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Shmt1P50431 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.75□□□□□ -0.37
Shmt1P50431 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.74□□□□□ -0.37
Shmt1P50431 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Shmt1P50431 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms