Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
SftpbP50405 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Gm37542-201ENSMUST00000192563 2832 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.34□□□□□ -0.43
SftpbP50405 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.34□□□□□ -0.43
SftpbP50405 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Gm45428-201ENSMUST00000209619 1789 ntBASIC12.34□□□□□ -0.43
SftpbP50405 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Dctn4-202ENSMUST00000223590 1530 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
SftpbP50405 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC12.34□□□□□ -0.43
SftpbP50405 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.34□□□□□ -0.43
SftpbP50405 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Gm13875-201ENSMUST00000120162 282 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
SftpbP50405 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.34□□□□□ -0.43
SftpbP50405 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Gm37201-201ENSMUST00000191845 523 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.34□□□□□ -0.43
SftpbP50405 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.34□□□□□ -0.43
SftpbP50405 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
SftpbP50405 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
SftpbP50405 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Gm26684-202ENSMUST00000228229 8257 ntBASIC12.34□□□□□ -0.43
SftpbP50405 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
SftpbP50405 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC12.34□□□□□ -0.43
SftpbP50405 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC12.33□□□□□ -0.44
SftpbP50405 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
SftpbP50405 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC12.33□□□□□ -0.44
SftpbP50405 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC12.33□□□□□ -0.44
SftpbP50405 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Gm13570-201ENSMUST00000140763 309 ntBASIC12.33□□□□□ -0.44
SftpbP50405 Gm24548-201ENSMUST00000158650 108 ntBASIC12.33□□□□□ -0.44
SftpbP50405 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
SftpbP50405 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC12.33□□□□□ -0.44
SftpbP50405 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.33□□□□□ -0.44
SftpbP50405 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SftpbP50405 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
SftpbP50405 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
SftpbP50405 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
SftpbP50405 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
SftpbP50405 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
SftpbP50405 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
SftpbP50405 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms