Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm15806-201ENSMUST00000120696 955 ntBASIC10□□□□□ -0.81
Nkx2-1P50220 Gm2231-201ENSMUST00000125661 612 ntBASIC10□□□□□ -0.81
Nkx2-1P50220 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10□□□□□ -0.81
Nkx2-1P50220 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm5896-201ENSMUST00000189662 1024 ntBASIC10□□□□□ -0.81
Nkx2-1P50220 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm37922-201ENSMUST00000195596 455 ntBASIC10□□□□□ -0.81
Nkx2-1P50220 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm9794-201ENSMUST00000202370 423 ntBASIC10□□□□□ -0.81
Nkx2-1P50220 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm43760-201ENSMUST00000202120 3015 ntBASIC10□□□□□ -0.81
Nkx2-1P50220 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Nkx2-1P50220 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Nkx2-1P50220 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm5912-201ENSMUST00000122282 1438 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm15897-201ENSMUST00000117770 1486 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm43823-201ENSMUST00000197391 1808 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Snord83b-201ENSMUST00000104546 94 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 H2-Pa-201ENSMUST00000182803 626 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm9124-201ENSMUST00000191789 1092 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm9113-201ENSMUST00000192510 1018 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm9131-201ENSMUST00000193557 1089 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm9121-201ENSMUST00000193749 1071 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 AC153974.2-201ENSMUST00000218577 1025 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Wdyhv1-206ENSMUST00000227142 786 ntBASIC9.99□□□□□ -0.81
Nkx2-1P50220 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Nkx2-1P50220 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Gm37422-201ENSMUST00000193794 4718 ntBASIC9.98□□□□□ -0.81
Nkx2-1P50220 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Nkx2-1P50220 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms