Protein–RNA interactions for Protein: P48754

Brca1, Breast cancer type 1 susceptibility protein homolog, mousemouse

Predictions only

Length 1,812 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca1P48754 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Brca1P48754 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Brca1P48754 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
Brca1P48754 Gm14270-201ENSMUST00000118388 846 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Gm13445-201ENSMUST00000121664 307 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC13.34□□□□□ -0.27
Brca1P48754 Gm23675-201ENSMUST00000157311 125 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Gm16240-201ENSMUST00000161924 614 ntTSL 2 BASIC13.34□□□□□ -0.27
Brca1P48754 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.34□□□□□ -0.27
Brca1P48754 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC13.34□□□□□ -0.27
Brca1P48754 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Brca1P48754 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Brca1P48754 AC122840.1-201ENSMUST00000220915 3334 ntBASIC13.34□□□□□ -0.27
Brca1P48754 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.33□□□□□ -0.27
Brca1P48754 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.33□□□□□ -0.27
Brca1P48754 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Brca1P48754 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Brca1P48754 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Brca1P48754 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Brca1P48754 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Brca1P48754 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Gm14132-201ENSMUST00000117188 1719 ntBASIC13.33□□□□□ -0.28
Brca1P48754 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Gm5053-201ENSMUST00000208361 1678 ntBASIC13.33□□□□□ -0.28
Brca1P48754 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC13.33□□□□□ -0.28
Brca1P48754 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC13.33□□□□□ -0.28
Brca1P48754 Gm12194-201ENSMUST00000117756 1012 ntBASIC13.33□□□□□ -0.28
Brca1P48754 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Brca1P48754 Gm13572-201ENSMUST00000153675 559 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC13.33□□□□□ -0.28
Brca1P48754 BC106175-201ENSMUST00000218578 695 ntTSL 5 BASIC13.33□□□□□ -0.28
Brca1P48754 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Brca1P48754 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Brca1P48754 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.33□□□□□ -0.28
Brca1P48754 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Brca1P48754 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.32□□□□□ -0.28
Brca1P48754 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Gm16167-201ENSMUST00000160428 1065 ntBASIC13.32□□□□□ -0.28
Brca1P48754 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.32□□□□□ -0.28
Brca1P48754 1810013D15Rik-201ENSMUST00000029827 300 ntTSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Gm10263-201ENSMUST00000085163 300 ntBASIC13.32□□□□□ -0.28
Brca1P48754 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC13.32□□□□□ -0.28
Brca1P48754 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 AC158636.1-201ENSMUST00000220118 1393 ntBASIC13.32□□□□□ -0.28
Brca1P48754 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Brca1P48754 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC13.32□□□□□ -0.28
Brca1P48754 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Brca1P48754 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC13.32□□□□□ -0.28
Brca1P48754 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.32□□□□□ -0.28
Brca1P48754 Fam212a-201ENSMUST00000048568 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Brca1P48754 Mir326-201ENSMUST00000083637 95 ntBASIC13.32□□□□□ -0.28
Brca1P48754 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC13.32□□□□□ -0.28
Brca1P48754 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Brca1P48754 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Brca1P48754 Mocs2-216ENSMUST00000184672 1447 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Brca1P48754 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brca1P48754 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brca1P48754 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Brca1P48754 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Brca1P48754 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Brca1P48754 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms