Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC11.62□□□□□ -0.55
Prox1P48437 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC11.62□□□□□ -0.55
Prox1P48437 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Prox1P48437 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
Prox1P48437 Gm17230-201ENSMUST00000171194 3942 ntBASIC11.62□□□□□ -0.55
Prox1P48437 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Prox1P48437 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Prox1P48437 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Prox1P48437 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Prox1P48437 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
Prox1P48437 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.61□□□□□ -0.55
Prox1P48437 Gm24231-201ENSMUST00000104315 133 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Snord83b-201ENSMUST00000104546 94 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC11.61□□□□□ -0.55
Prox1P48437 Gm12384-201ENSMUST00000119228 919 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Mir1894-201ENSMUST00000122802 81 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.61□□□□□ -0.55
Prox1P48437 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC11.61□□□□□ -0.55
Prox1P48437 Rmrp-201ENSMUST00000157463 271 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC11.61□□□□□ -0.55
Prox1P48437 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.61□□□□□ -0.55
Prox1P48437 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Prox1P48437 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Prox1P48437 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.61□□□□□ -0.55
Prox1P48437 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.61□□□□□ -0.55
Prox1P48437 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.61□□□□□ -0.55
Prox1P48437 AL732506.1-201ENSMUST00000226420 281 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Gm9899-201ENSMUST00000065519 555 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Gm24526-201ENSMUST00000082921 158 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 AC127597.1-201ENSMUST00000225697 5711 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Gm29100-201ENSMUST00000187564 4410 ntBASIC11.61□□□□□ -0.55
Prox1P48437 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC11.61□□□□□ -0.55
Prox1P48437 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Prox1P48437 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Prox1P48437 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Prox1P48437 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC11.6□□□□□ -0.55
Prox1P48437 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.6□□□□□ -0.55
Prox1P48437 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC11.6□□□□□ -0.55
Prox1P48437 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Gm6244-201ENSMUST00000178732 841 ntBASIC11.6□□□□□ -0.55
Prox1P48437 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.6□□□□□ -0.55
Prox1P48437 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Prox1P48437 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Prox1P48437 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms