Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.3□□□□□ -0.6
Sox2P48432 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Sox2P48432 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox2P48432 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Gm2606-201ENSMUST00000100754 1002 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Gm24830-201ENSMUST00000102024 166 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Gm12286-201ENSMUST00000119246 1002 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Gm11814-201ENSMUST00000119515 929 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Gm12502-201ENSMUST00000120197 444 ntBASIC11.29□□□□□ -0.6
Sox2P48432 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11.29□□□□□ -0.6
Sox2P48432 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Gm6745-201ENSMUST00000199216 526 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Sox2P48432 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Sox2P48432 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11.29□□□□□ -0.6
Sox2P48432 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sox2P48432 Gm26232-201ENSMUST00000083360 166 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sox2P48432 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.29□□□□□ -0.6
Sox2P48432 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sox2P48432 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox2P48432 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Sox2P48432 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox2P48432 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox2P48432 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox2P48432 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Gm12036-201ENSMUST00000120008 530 ntBASIC11.28□□□□□ -0.6
Sox2P48432 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.28□□□□□ -0.6
Sox2P48432 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Gm44405-201ENSMUST00000198952 126 ntBASIC11.28□□□□□ -0.6
Sox2P48432 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 Gm5904-201ENSMUST00000210286 865 ntBASIC11.28□□□□□ -0.6
Sox2P48432 Gm39404-201ENSMUST00000216350 313 ntBASIC11.28□□□□□ -0.6
Sox2P48432 Gm17794-201ENSMUST00000220252 955 ntBASIC11.28□□□□□ -0.6
Sox2P48432 AC126253.1-202ENSMUST00000226732 835 ntBASIC11.28□□□□□ -0.6
Sox2P48432 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sox2P48432 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Adarb1-204ENSMUST00000105406 6662 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.28□□□□□ -0.6
Sox2P48432 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sox2P48432 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Sox2P48432 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sox2P48432 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Sox2P48432 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms