Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC10.93□□□□□ -0.66
Rfx3P48381 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Rfx3P48381 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Rfx3P48381 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Accs-201ENSMUST00000041593 2036 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Aldh3a2-202ENSMUST00000074127 3091 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Gm12957-201ENSMUST00000117835 377 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Gm12314-201ENSMUST00000118104 538 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC10.92□□□□□ -0.66
Rfx3P48381 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Rfx3P48381 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.92□□□□□ -0.66
Rfx3P48381 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC10.92□□□□□ -0.66
Rfx3P48381 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Gm10076-201ENSMUST00000073238 384 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Rfx3P48381 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Gm44260-201ENSMUST00000204946 2094 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Gm43267-201ENSMUST00000199664 1796 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Gm5884-201ENSMUST00000036712 1479 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.92□□□□□ -0.66
Rfx3P48381 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Gm38187-201ENSMUST00000195609 4709 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.92□□□□□ -0.66
Rfx3P48381 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Rfx3P48381 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.91□□□□□ -0.66
Rfx3P48381 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Rfx3P48381 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Rfx3P48381 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Rfx3P48381 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Sema3f-201ENSMUST00000080560 3395 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Gm13736-201ENSMUST00000119272 253 ntBASIC10.91□□□□□ -0.66
Rfx3P48381 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.91□□□□□ -0.66
Rfx3P48381 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Gm27023-201ENSMUST00000182372 285 ntBASIC10.91□□□□□ -0.66
Rfx3P48381 Gm27514-201ENSMUST00000183692 110 ntBASIC10.91□□□□□ -0.66
Rfx3P48381 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC10.91□□□□□ -0.66
Rfx3P48381 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC10.91□□□□□ -0.66
Rfx3P48381 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC10.91□□□□□ -0.66
Rfx3P48381 AC154462.2-201ENSMUST00000227519 370 ntBASIC10.91□□□□□ -0.66
Rfx3P48381 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.91□□□□□ -0.66
Rfx3P48381 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Rfx3P48381 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms