Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 B9d1os-201ENSMUST00000137010 674 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Gm17040-202ENSMUST00000170597 889 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rfx2P48379 Gm37986-201ENSMUST00000193285 383 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 Gm42937-201ENSMUST00000197360 752 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 AC154252.2-201ENSMUST00000223593 767 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.69□□□□□ -0.38
Rfx2P48379 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.69□□□□□ -0.38
Rfx2P48379 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC12.69□□□□□ -0.38
Rfx2P48379 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Rfx2P48379 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Rfx2P48379 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Rfx2P48379 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rfx2P48379 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rfx2P48379 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rfx2P48379 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.68□□□□□ -0.38
Rfx2P48379 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rfx2P48379 Gm24934-201ENSMUST00000103764 111 ntBASIC12.68□□□□□ -0.38
Rfx2P48379 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.68□□□□□ -0.38
Rfx2P48379 Gm9083-201ENSMUST00000120423 819 ntBASIC12.68□□□□□ -0.38
Rfx2P48379 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.68□□□□□ -0.38
Rfx2P48379 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.68□□□□□ -0.38
Rfx2P48379 Gm9022-201ENSMUST00000182482 992 ntBASIC12.68□□□□□ -0.38
Rfx2P48379 AY036118-201ENSMUST00000200021 923 ntBASIC12.68□□□□□ -0.38
Rfx2P48379 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC12.68□□□□□ -0.38
Rfx2P48379 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC12.68□□□□□ -0.38
Rfx2P48379 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rfx2P48379 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Rfx2P48379 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rfx2P48379 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Rfx2P48379 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Rfx2P48379 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.67□□□□□ -0.38
Rfx2P48379 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Rfx2P48379 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.67□□□□□ -0.38
Rfx2P48379 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.67□□□□□ -0.38
Rfx2P48379 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Rfx2P48379 Ighv5-7-201ENSMUST00000192302 244 ntBASIC12.67□□□□□ -0.38
Rfx2P48379 Gm3786-201ENSMUST00000202659 378 ntBASIC12.67□□□□□ -0.38
Rfx2P48379 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Rfx2P48379 Trappc4-206ENSMUST00000217163 1185 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 134.9 ms