Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-6P43688 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Nkx2-6P43688 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.45□□□□□ -0.58
Nkx2-6P43688 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.45□□□□□ -0.58
Nkx2-6P43688 Gm23912-201ENSMUST00000104687 87 ntBASIC11.45□□□□□ -0.58
Nkx2-6P43688 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.45□□□□□ -0.58
Nkx2-6P43688 Rprl1-201ENSMUST00000158050 327 ntBASIC11.45□□□□□ -0.58
Nkx2-6P43688 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Gm3332-201ENSMUST00000189337 928 ntBASIC11.45□□□□□ -0.58
Nkx2-6P43688 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Olfr959-201ENSMUST00000079178 1055 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Nkx2-6P43688 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.45□□□□□ -0.58
Nkx2-6P43688 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm24891-201ENSMUST00000104391 136 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm12165-201ENSMUST00000117047 342 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm9555-201ENSMUST00000200908 583 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.44□□□□□ -0.58
Nkx2-6P43688 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.43□□□□□ -0.58
Nkx2-6P43688 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Nkx2-6P43688 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms