Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 2310040G07Rik-202ENSMUST00000145897 462 ntTSL 3 BASIC11.79□□□□□ -0.52
Sox18P43680 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC11.79□□□□□ -0.52
Sox18P43680 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox18P43680 Gm6397-201ENSMUST00000161973 1069 ntBASIC11.79□□□□□ -0.52
Sox18P43680 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC11.79□□□□□ -0.52
Sox18P43680 5430405H02Rik-202ENSMUST00000176134 1196 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Gm8494-201ENSMUST00000178171 1233 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Gm5621-201ENSMUST00000187303 640 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.79□□□□□ -0.52
Sox18P43680 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox18P43680 4930557J02Rik-201ENSMUST00000202325 1075 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox18P43680 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC11.79□□□□□ -0.52
Sox18P43680 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC11.79□□□□□ -0.52
Sox18P43680 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Sox18P43680 Mirlet7i-201ENSMUST00000083472 85 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Mir339-201ENSMUST00000083659 96 ntBASIC11.79□□□□□ -0.52
Sox18P43680 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.79□□□□□ -0.52
Sox18P43680 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Sox18P43680 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Sox18P43680 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.78□□□□□ -0.52
Sox18P43680 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.78□□□□□ -0.52
Sox18P43680 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Gm10999-201ENSMUST00000108743 207 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox18P43680 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox18P43680 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 D6Ertd474e-203ENSMUST00000160188 683 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox18P43680 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Gm16285-201ENSMUST00000162999 347 ntBASIC11.78□□□□□ -0.52
Sox18P43680 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox18P43680 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox18P43680 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC11.78□□□□□ -0.52
Sox18P43680 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.78□□□□□ -0.52
Sox18P43680 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC11.78□□□□□ -0.52
Sox18P43680 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Gm19590-201ENSMUST00000201551 1195 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Olfr181-203ENSMUST00000205742 1104 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Sox18P43680 Arhgef33-207ENSMUST00000224966 490 ntBASIC11.78□□□□□ -0.52
Sox18P43680 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.78□□□□□ -0.52
Sox18P43680 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Sox18P43680 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Sox18P43680 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Sox18P43680 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
Sox18P43680 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Sox18P43680 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Sox18P43680 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms