Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfsf4P43488 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfsf4P43488 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfsf4P43488 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Tnfsf4P43488 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfsf4P43488 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm13875-201ENSMUST00000120162 282 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm13316-201ENSMUST00000140537 691 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm8835-201ENSMUST00000173096 1169 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm27731-201ENSMUST00000185192 107 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm6266-201ENSMUST00000203844 806 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.65□□□□□ -0.54
Tnfsf4P43488 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Tnfsf4P43488 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfsf4P43488 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.65□□□□□ -0.55
Tnfsf4P43488 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Tnfsf4P43488 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gm8602-201ENSMUST00000184045 607 ntBASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gm18711-201ENSMUST00000199341 750 ntBASIC11.64□□□□□ -0.55
Tnfsf4P43488 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC11.64□□□□□ -0.55
Tnfsf4P43488 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gm43102-201ENSMUST00000201004 2324 ntBASIC11.64□□□□□ -0.55
Tnfsf4P43488 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.64□□□□□ -0.55
Tnfsf4P43488 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.63□□□□□ -0.55
Tnfsf4P43488 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Tnfsf4P43488 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms