Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdh4P39038 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdh4P39038 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.6□□□□□ -0.55
Cdh4P39038 H2-M6-ps-201ENSMUST00000119193 1034 ntBASIC11.6□□□□□ -0.55
Cdh4P39038 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Rprl1-201ENSMUST00000158050 327 ntBASIC11.6□□□□□ -0.55
Cdh4P39038 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC11.6□□□□□ -0.55
Cdh4P39038 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cdh4P39038 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cdh4P39038 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cdh4P39038 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.6□□□□□ -0.55
Cdh4P39038 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 CT009757.3-201ENSMUST00000223367 2320 ntBASIC11.59□□□□□ -0.55
Cdh4P39038 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC11.59□□□□□ -0.55
Cdh4P39038 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.59□□□□□ -0.55
Cdh4P39038 Gm9176-201ENSMUST00000219955 1120 ntBASIC11.59□□□□□ -0.55
Cdh4P39038 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Cdh4P39038 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Cdh4P39038 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Cdh4P39038 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Cdh4P39038 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Cdh4P39038 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.58□□□□□ -0.56
Cdh4P39038 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Cdh4P39038 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms