Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 4931428F04Rik-201ENSMUST00000014981 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.54□□□□□ -0.88
Rom1P32958 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC9.54□□□□□ -0.88
Rom1P32958 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC9.54□□□□□ -0.88
Rom1P32958 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.54□□□□□ -0.88
Rom1P32958 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.54□□□□□ -0.88
Rom1P32958 Pdgfrb-201ENSMUST00000025522 5407 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Gm42427-201ENSMUST00000200473 5292 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Sema5b-201ENSMUST00000050625 4350 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Rom1P32958 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Gm7964-201ENSMUST00000051522 1378 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Celf1-204ENSMUST00000111448 4432 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Gm2606-201ENSMUST00000100754 1002 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Gm12286-201ENSMUST00000119246 1002 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Gm13315-201ENSMUST00000120376 991 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC9.53□□□□□ -0.88
Rom1P32958 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC9.53□□□□□ -0.88
Rom1P32958 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Gm2495-201ENSMUST00000191160 466 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC9.53□□□□□ -0.88
Rom1P32958 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.53□□□□□ -0.88
Rom1P32958 Gm32025-201ENSMUST00000217960 307 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 AC155286.1-201ENSMUST00000218632 448 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Gm19163-201ENSMUST00000223313 780 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Gm807-202ENSMUST00000224929 408 ntBASIC9.53□□□□□ -0.88
Rom1P32958 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC9.53□□□□□ -0.88
Rom1P32958 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC9.53□□□□□ -0.88
Rom1P32958 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC9.53□□□□□ -0.88
Rom1P32958 Zfp639-201ENSMUST00000029203 1458 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC9.53□□□□□ -0.88
Rom1P32958 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Rom1P32958 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Rom1P32958 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Rom1P32958 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.88
Rom1P32958 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC9.52□□□□□ -0.88
Rom1P32958 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Rom1P32958 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.52□□□□□ -0.88
Rom1P32958 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC9.52□□□□□ -0.88
Rom1P32958 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Rom1P32958 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Rom1P32958 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC9.52□□□□□ -0.88
Rom1P32958 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.88
Rom1P32958 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC9.52□□□□□ -0.89
Rom1P32958 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC9.52□□□□□ -0.89
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms