Protein–RNA interactions for Protein: P31650

Slc6a11, Sodium- and chloride-dependent GABA transporter 3, mousemouse

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a11P31650 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Gm6015-201ENSMUST00000217493 1586 ntBASIC11.5□□□□□ -0.57
Slc6a11P31650 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Slc6a11P31650 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Gm13315-201ENSMUST00000120376 991 ntBASIC11.49□□□□□ -0.57
Slc6a11P31650 Gm12176-201ENSMUST00000121420 875 ntBASIC11.49□□□□□ -0.57
Slc6a11P31650 Gm14017-201ENSMUST00000121934 386 ntBASIC11.49□□□□□ -0.57
Slc6a11P31650 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Gm37986-201ENSMUST00000193285 383 ntBASIC11.49□□□□□ -0.57
Slc6a11P31650 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Gm5781-201ENSMUST00000219792 443 ntBASIC11.49□□□□□ -0.57
Slc6a11P31650 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Slc6a11P31650 Rab14-201ENSMUST00000028238 3081 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.49□□□□□ -0.57
Slc6a11P31650 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Slc6a11P31650 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 D17H6S53E-201ENSMUST00000061859 2142 ntAPPRIS P1 TSL 3 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Gm10434-201ENSMUST00000101158 471 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Gm13492-201ENSMUST00000119772 665 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 Gm9083-201ENSMUST00000120423 819 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Timm10b-208ENSMUST00000151193 1083 ntTSL 2 BASIC11.48□□□□□ -0.57
Slc6a11P31650 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Gm19208-201ENSMUST00000213861 912 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 AC122371.3-201ENSMUST00000223402 1061 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 Morn2-202ENSMUST00000227729 656 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 AC108416.1-202ENSMUST00000228927 1201 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.48□□□□□ -0.57
Slc6a11P31650 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Slc6a11P31650 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.48□□□□□ -0.57
Slc6a11P31650 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a11P31650 Sez6l2-201ENSMUST00000106332 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a11P31650 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a11P31650 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a11P31650 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a11P31650 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Slc6a11P31650 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 59.1 ms